Raphael Y. de Camargo

PUBLICATIONS:

• Armazenamento distribuído de dados e checkpointing de aplicações paralelas em grades oportunistas. Department of Computer Science, Institute of Mathematics and Statistics of University of São Paulo. May 2007. (More info and PDF file)

• Inferência de Conexões Sinápticas em Redes Neurais Biologicamente Plausíveis. Department of General Physics, Institute of Physics of University of São Paulo. July 2003.

• Um sistema complexo: cérebro e computador. Eles são mesmo parecidos? Renan Recio, Raphael Y. de Camargo In: Edgard Pereira Neves; Maria Teresa Carthery-Goular;, Roberta Roque Baradel. (Org.). CuriosaMente: descobrindo a neurociência. Editora UFABC, 2016, p. 139-164.


• Efficient Parallel Application Execution on Opportunistic Desktop Grids Francisco Silva e Silva, Fabio Kon, Daniel Batista, Alfredo Goldman, Fabio Costa, Raphael Y. de Camargo. Grid Computing - Technology and Applications, Widespread Coverage and New Horizons. Editor: Soha Maad, ISBN 978-953-51-0604-3, pages 113-134, InTech Europe, 2012;


• The Grid Middleware Architectural Pattern. Raphael Y. de Camargo, Andrei Goldchleger, Marcio Carneiro, and Fabio Kon. Pattern Languages of Program Design 5. Editors: Dragos Manolescu, James Noble, and Markus Völter, pages 337-356. Addison Wesley Publishing Company, 2006.

• Dynamic representation of time in brain states. Fernanda Bueno, Vanessa Morita, Raphael Y. de Camargo, Marcelo Reyes, Marcelo Caetano, André Cravo. Scientific Reports, Volume 7, Springer Nature, 2017.


• Finding exact hitting set solutions for systems biology applications using heterogeneous GPU clusters. Danilo Carastan-Santos, Raphael Y. de Camargo, David Martins, Siang Song, Luiz Rozante. Future Generation Computer Systems, Volume 67, pg 418-429, Elsevier, 2016.


• Gene regulatory networks inference using a multi-GPU exhaustive search algorithm. Fabricio Borelli, Raphael Y. de Camargo, David Martins Jr. and Luiz Rozante. BMC Bioinformatics, Volume 14, Issue S5, BioMed Central Ltd, 2013.


• A Multi-GPU Algorithm for Large-scale Neuronal Networks. Raphael Y. de Camargo, Luiz Rozante, and Siang Song. Concurrency and Computation: Practice and Experience, Volume 23, Issue 6, pages 556-572, John Wiley and Sons, 2011.


• Application Execution Management on the InteGrade Opportunistic Grid Middleware. Francisco Silva e Silva, Fabio Kon, Alfredo Goldman, Marcelo Finger, Raphael Y Camargo, Fernando C Filho, Fabio M Costa, Journal of Parallel and Distributed Computing, vol. 70, issue 5, May 2010, pages 573-583, Elsevier.


• Reliable Management of Checkpointing and Application Data in Opportunistic Grids. Raphael Y. de Camargo, Fernando Castor, Fabio Kon, Journal of the Brazilian Computer Society, vol 16, Number 3, pp. 177-190, 2010, Springer, London.


• Exploiting a Generic Approach to Construct Component-based Systems Software in Linux Environments. Jo Ueyama, Edmundo Madeira, F. Taiani, Raphael Y. de Camargo, Paul Grace, International Journal of Software Engineering and Knowledge Engineering, Volume: 20, Issue: 6, pp. 843-873, World Scientific, 2010.


• Strategies for Checkpoint Storage on Opportunistic Grids. Raphael Y. de Camargo, Fabio Kon, and Renato Cerqueira. IEEE Distributed Systems Online, Volume 7, Number 9, September 2006, IEEE Computer Society.


• Checkpointing-based Rollback Recovery for Parallel Applications on the InteGrade Grid Middleware. Raphael Y. de Camargo, Andrei Goldchleger, Fabio Kon, and Alfredo Goldman. Concurrency and Computation: Practice & Experience. Volume 18, Issue 6, pp. 567-579, May 2006. John Wiley and Sons Ltd

• AMARIS, MARCOS ; de Camargo, Raphael Y. ; DYAB, MOHAMED ; Goldman, Alfredo ; TRYSTRAM, DENIS. A comparison of GPU execution time prediction using machine learning and analytical modeling. In: 2016 IEEE 15th International Symposium on Network Computing and Applications (NCA), 2016, Cambridge. 2016 IEEE 15th International Symposium on Network Computing and Applications (NCA), 2016. p. 326.


• CARASTAN-SANTOS, DANILO ; CAMARGO, RAPHAEL YOKOINGAWA DE ; MARTINS, DAVID CORREA ; SONG, SIANG WUN ; ROZANTE, LUIZ CARLOS SILVA ; BORELLI, FABRIZIO FERREIRA. A Multi-GPU Hitting Set Algorithm for GRNs Inference. In: 2015 15th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGrid), 2015, Shenzhen. p. 313.


• SANT'ANA, LUIS ; CORDEIRO, DANIEL ; CAMARGO, RAPHAEL. PLB-HeC: A Profile-Based Load-Balancing Algorithm for Heterogeneous CPU-GPU Clusters. In: 2015 IEEE International Conference on Cluster Computing (CLUSTER), 2015, Chicago. p. 96-105.


• AMARIS, MARCOS ; CORDEIRO, DANIEL ; Goldman, Alfredo ; CAMARGO, RAPHAEL Y. DE. A Simple BSP-based Model to Predict Execution Time in GPU Applications. In: 2015 IEEE 22nd International Conference on High Performance Computing (HiPC), 2015, Bengaluru. p. 285-294.


• FERREIRA, CLEBER S. ; Camargo, Raphael Y. ; SONG, SIANG WUN. A Parallel Maximum Subarray Algorithm on GPUs. In: International Symposium on Computer Architecture and High Performance Computing Workshop (SBACPADW), 5th Workshop on Applications for Multi-Core Architecture (WAMCA), 2014. p. 12.


• A Load Distribution Algorithm Based on Profiling for Heterogeneous GPU Clusters. Raphael Y. de Camargo. Third Workshop on Applications for Multi-Core Architecture (WAMCA), October, 2012, New York, USA, pages 1-6, IEEE, 2012.


• Accelerating gene regulatory networks inference through GPU/CUDA programming. Fabrizio Borelli, Raphael Y. de Camargo, David Martins Jr., Beatriz Stransky, and Luiz Rozante. IEEE 2nd International Conference on Computational Advances in Bio and Medical Sciences (ICCABS'2012), , 2012, Las Vegas, EUA, pages 556-572, IEEE, 2012.


• A Multi-GPU Algorithm for Communication in Neuronal Network Simulations. Raphael Y. de Camargo. The 18th Annual International Conference on High Performance Computing (HiPC 2011), Bangalore, India, December 2011. (acceptance rate 19,4%).


• Simulação de Neurônios Biologicamente Realistas em GPUs. Raphael Y. de Camargo. Décimo Simpósio em Sistemas Computacionais (WSCAD-SSC 2009), São Paulo, Brazil, October 2009. (acceptance rate 34,8%).


• Um Serviço Escalável e Robusto para Gerenciamento de Membros em Grades Computacionais de Grande Escala. Fernando Castor Filho, Rodrigo Maia, Augusta Figueiredo, Raphael Y. de Camargo and Fabio Kon. Proceedings of the 7th Workshop on Grid Computing and Applications (WCGA 2009), Recife, Brasil, 2009.


• Exploiting a Generic Approach for Constructing Mobile Device Applications. Jo Ueyama, V. Pinto, Edmundo Madeira, Paul Grace, T. M. Johnson, Raphael Y. de Camargo. The Fourth International Conference on COMmunication System softWAre and middlewaRE (COMMSWARE 2009), Dublin, Ireland, 2009.


• Efficient Maintenance of Distributed Data in Highly Dynamic Opportunistic Grids. Raphael Y. de Camargo, Fernando Castor Filho and Fabio Kon. The 24th ACM Symposium on Applied Computing (SAC 2009), Track on Dependable and Adaptive Distributed Systems (DADS), Honolulu, HI, USA, March 2009.


• A Group Membership Service for Large-Scale Grids. Fernando Castor Filho, Augusta Marques, Raphael Y. de Camargo and Fabio Kon. The 6th ACM/IFIP/USENIX International Workshop on Middleware for Grid Computing (MGC'08), Leuven, Belgium, December 2008.


• Armazenamento Distribuído de Dados e Checkpointing de Aplicações Paralelas em Grades Oportunistas. Raphael Y. de Camargo and Fabio Kon. Concurso de Teses e Dissertações do Simpósio Brasileiro de Computação, 2008 Belém, Brazil, July 2008.


• Design and Implementation of a Middleware for Data Storage in Opportunistic Grids. Raphael Y. de Camargo and Fabio Kon. In Proceedings of the 7th IEEE International Symposium on Cluster Computing and the Grid (CCGRID 2007), Rio de Janeiro, Brazil, May 2007, p. 23-30.


• Distributed Data Storage for Opportunistic Grids. Raphael Y. de Camargo and Fabio Kon. In Proceedings of the 3rd International Middleware Doctoral Symposium (MDS 2006), Melbourne, Australia, November 2006.


• Strategies for Storage of Checkpointing Data Using Non-dedicated Repositories on Grid Systems. Raphael Y. de Camargo, Renato Cerqueira, and Fabio Kon. In 3rd ACM/IFIP/USENIX International Workshop on Middleware for Grid Computing, Grenoble, France, November 28-29, 2005.


• Portable Checkpointing and Communications for BSP Applications on Dynamic Heterogeneous Grid Environments. Raphael Y. de Camargo, Fabio Kon, and Alfredo Goldman. In Proceedings of the 17th International Symposium on Computer Architecture and High Performance Computing (SBAC-PAD 2005). Rio de Janeiro, Brazil, Oct 24-27, 2005.


• Checkpointing-based Rollback Recovery for Parallel Applications on the InteGrade Grid Middleware. Raphael Y. de Camargo, Andrei Goldchleger, Fabio Kon, and Alfredo Goldman. ACM/IFIP/USENIX 2nd International Workshop on Middleware for Grid Computing. Toronto, Canada, October 2004.


• Grid: An Architectural Pattern. Raphael Y. de Camargo, Andrei Goldchleger, Marcio Carneiro, and Fabio Kon. The 11th Conference on Pattern Languages of Programs (PLoP'2004). Monticello, USA, September 2004.

• The InteGrade Project. Eloiza Sonoda, Fernando Castor Filho, Raphael Y. de Camargo, Fabio Kon and Siang Song. 7th IEEE International Symposium on Cluster Computing and the Grid (Poster Section), Rio de Janeiro, Brazil, May 2007.

• InteGrade: a Tool for Executing Parallel Applications on a Grid for Opportunistic Computing. José Braga Pinheiro Junior, Raphael Y. de Camargo, Andrei Goldchleger and Fabio Kon. Proceedings of the 23th Brazilian Symposium on Computer Networks (SBRC Tools Track), May 2005. Fortaleza, Brazil.